They can all co-exist if you know what you are doing, but I recommend choosing either the Homebrew method or the official installer and not both. It can get confusing and you may accidently install a package to one version of Python while your IDE is using a different version. In addition to the system Python 2 and Python 3, you can also have Python 3 installed from the official installer as well as Homebrew's Python 3 all at once. It is possible to have multiple versions of Python installed.
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